BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039C01LP1|AL430669
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1641 1732 0.0
>3x_Contig1641
Length = 13261
Score = 1732 bits (873), Expect = 0.0
Identities = 893/898 (99%), Gaps = 3/898 (0%)
Strand = Plus / Minus
Query: 1 atccctaattaaagaattagagtcattagcgtgtgggtcggtgatttcaagtcctgaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2908 atccctaattaaagaattagagtcattagcgtgtgggtcggtgatttcaagtcctgaagt 2849
Query: 61 ctcaccgccagcaaaagtgttccgatcttcatcttcatcatcacctcctttcaatatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2848 ctcaccgccagcaaaagtgttccgatcttcatcttcatcatcacctcctttcaatatatc 2789
Query: 121 agagaaggattggaatttagacttagacttgggtttctgcgatggagaaggtgttgacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2788 agagaaggattggaatttagacttagacttgggtttctgcgatggagaaggtgttgacct 2729
Query: 181 aggtaaagcaatcttttggccactcaaggttcttgcgtatgtmacgtcatctttcgccga 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2728 aggtaaagcaatcttttggccactcaaggttcttgcgtatgtaacgtcatctttcgccga 2669
Query: 241 ggagttagacaattcaccctggctagcagcttttggaatcggctgttcaaaggatgcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2668 ggagttagacaattcaccctggctagcagcttttggaatcggctgttcaaaggatgcttt 2609
Query: 301 cgttttaggctcttgctcatcctgttgggtagcatagaaggcattcaatgcttctcccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2608 cgttttaggctcttgctcatcctgttgggtagcatagaaggcattcaatgcttctcccaa 2549
Query: 361 gtcaccaaactggtttaaataatctgaagcgacattcactgaggtgttggtcaatgcgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2548 gtcaccaaactggtttaaataatctgaagcgacattcactgaggtgttggtcaatgcgac 2489
Query: 421 aaattgctggatttgttcgtcagacatggtaaatatcgtatgtggtatctcagattctat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2488 aaattgctggatttgttcgtcagacatggtaaatatcgtatgtggtatctcagattctat 2429
Query: 481 atcgtgttacaattgtaattgtatcgtcgtaatggagtgcaatatcttgccatgacaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2428 atcgtgttacaattgtaattgtatcgtcgtaatggagtgcaatatcttgccatgacaagt 2369
Query: 541 ggcaagttttccttatggcatctctacctaaatgaaattgtcttaatttgaaagttcatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2368 ggcaagttttccttatggcatctctacctaaatgaaattgtcttaatttgaaagttcatt 2309
Query: 601 acttttcatagaaaaacctttaaaacgaatctgtaagaaaaggaaagtaacatgataaa- 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2308 acttttcatagaaaaacctttaaaacgaatctgtaagaaaaggaaagtaacatgataaag 2249
Query: 660 -cacagacatcttaggcaggatagtaactgagactgtggggaaatattatgtttgtagca 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2248 caacagacatcttaggcaggatagtaactgagactgtggggaaatattatgtttgtagca 2189
Query: 719 gaaatgttgtggtttgatgttttttttgaaacgaatgttgaatgcgtttataatatacaa 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2188 gaaatgttgtggtttgatgttttttttgaaacgaatgttgaatgcgtttataatatacaa 2129
Query: 779 gaggttatttaattattaaaaacataactcatgacagtttataatttgggggacctttaa 838
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2128 gaggttatttaattattaaaaacataactcatgacagtttataattt-ggggacctttaa 2070
Query: 839 cgattgaatatctttggaatgatgagcaaagatgaagttcgccattaaggtctatgaa 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2069 cgattgaatatctttggaatgatgagcaaagatgaagttcgccattaaggtctatgaa 2012
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7344
Number of Sequences: 1807
Number of extensions: 7344
Number of successful extensions: 117
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)